species:   Clros
pid:       PID2238
parent:    cro-mir-33
paralog:   
locus:     CADEHS020000010.2:1818632-1818687
matures:   ['UUUCGGUAGAUCUCAGCCU', '']
srr:       ERR5950923
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram CADEHS020000010.2:1818632-1818687

5 out of bounds
3 alignments
3 proper strand
3 stranded perfect matches

*********************              *********************
GUCGAUCAACCUAGGAAUAUAUGGGCAGUCCCCCAUUUUUCGGUAGAUCUCAGCCU
...((((.(((..((((...(((((......))))).))))))).)))).......
-------------------------------------UUUCGGUAGAUCUCAGCCU l=19 a=0 c
-------------------------------------------------------- l=0 a=0 c*
-----------UAGGAAUAUAUGGGCAGUC-------------------------- l=19 a=2 ma
-------------------------------------------------------- l=0 a=0 ma*

-----------------------------------UUUUUCGGUAGAUCUCAGC-- l=19 a=1 
-----------UAGGAAUAUAUGGGCAGUC-------------------------- l=19 a=2 (ma)

mb-00010
ax-0001000
ku-01
ss-101011101110
fn-011
